Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015879239.1_cds_XP_016437061.1_32855
CDS Infomation	[gene=LOC107763131] [db_xref=GeneID:107763131] [protein=lysine-specific demethylase JMJ25-like] [protein_id=XP_016437061.1] [location=complement(join(40595..40706,42264..42334,43638..43757,46885..46970,47069..47141,47229..47735,50555..50884,51815..52574,53132..53195,53288..53420,53586..53685,53873..53997,55079..57397))] [gbkey=CDS]
Sequence	ATGTTCACGCAAGAAGAGCAGATGCAGGGGAATTGGGATGGCCAGCAGCAAATTGTGGTA CCATTTGCAGAAAATGTAGTAGTTGCTACTGCTGCTGCTGGTGTTGTTATAGGTTCTAAA AAAAGAGGAAGACCACCAAAGGGTTTTAAAGAAAAAGGAGGATCAAAGGGTTCTTCTAAA AATAAGAGGGAAAATGTTGACGAAAATGTGGGAATTACAGTTAGTGGCATGAGGGATGTA AGTGGACAAGGGGTAGTTATGAATGAGAAGAAGAAACGAATCGGCAGACCAAAGGGTTCT ACGAATAAGAAGAGAAAGGTTGGAGAAAATGGGGAAGAATTGCCAAGTGCAGTTGACTTA GTTAATGGCTGTGGGGACATTCTTATCAAGAAGAAGAATGTAGGGGGAAAGCCCAAGGGT TCTAAGAACAAAAATAGAAATTTTGAACGAAACAAAGAAGGGATTGTCAAAAAGGCACAT CAAGGAAGGCCAAAGGGTTCAAAGAATAAGAAGAAAAATGTTACCAGTGATGAAATGGAA ATAGTGCTACCAATAGGTGATACTTGTCTTGAAAAGAGTAATGCTGAGATTATTGTTGCA AATGAAATGTCTAAAACTGACATTGTTGCAGCTGGTGATGTTGGGATAAGTGTAAACCAA GTTGCTGGACACAATGAGATAGTCAAGAAGAAAGCTGGTCGGCCCAAGGGTTCTAAGAAT AAGAAGAAAGATGGTCGGCCCAAGGGTTCCGAGAATAAGAAGAAAGTTGGTCGGCCCAAG GGTTCAAAGAACAAGAAGAAAGTCTTGATTGGTCTTCTGACTGTTGGCCATTGGAATGGA GGTGGAGGCAAAGAACATATAGTCAGGCAAGGCCAGCGTAGGGGTTCAAAGACTAAGAAG GAAATCACATTAGGCTATTTGAGTAATGCTAATGCTACTACTGGAGATGAAGTAGATGTT ATGCGCCAGGATGCGAGGAAGAAAAGAATCACTATGGCTGGTCAAAGTGGAGTAATTCTG AATGAGGAAGAAGGGATGATAGTCAAGAAGAACGATGGGCGCGGCAGACCCAAAAAGGGT TCAAACACCAAAAACAAACTTATACTAGGCCGTTCAAGGGATATTAATACTAATAATGGA TGTGGATACATGGATGCAGTCAGTCAGGAAGATAATGAAAAGAATTTTTTTTTAGCTGTG GGTAATGGAGACAGGATATTCAAGAAGAAGAGGCGTGGTCGGCCCAAGAGCTCAAAAAAT AAGAAGAGAAGTACTGGTGGTAATTTCATTGATGCTAATCTTAATAATGGAGGACAAGAT GTGGCTACTACGAGGATAGATGTGGTTGAAAAGGGAATTCTTTTAACTGAAGAAAATAGG GGAGACCTGAATGAATTTGCTTTTGGTTCTGCAGTTAGAGTAGTCAGGAGGAAGGGTGTC CTTGGACGGCCAAAGGGTTCAAAGAATAAAAAGAAAACTATTACAAGCAACTCCAGCGAT GTTTATTCTGGTAATGGAGTTGGAGCAATGAATATCTGGAAGGAACACGAGGATAAAACG GCGAGCCTGGCAACTGACCGCATGGAGATTCTGAGTGAAGTTACTATAGCTAAGAAGGAT AGCTGCAGCCTGCCCCATGGCTTACATAACGAGAATAAGATTGGTGAATCTGAAAAAGCT AATACTGTTAACTTCATTCCTTGTGAAAATGGGGTTTCTGAGCGGAAGGGTAGCCGAGGG AGGCCAAAGGGCTTGAAAAACAAAAAGAAAGTAGTATTTGATGCTGTAGAAATTCAGGGA ATGACAGGTGAAATTGCTGTTGATACTAATGGGGTAAATTTGAGCATCAAGCGAAAGAAT AGACCTGGACGACCCAAAGGTTCAACAAATAAGAAGTCAAAAAATAAGAGTGAAGAAAAT AATAAAACTGCAGTAGCACTTATAATGCATGATAACAGAGGAGGTAGTCAAGCTGAGCAG AAAGTGAAATTTTGTGGCCTGCTTCCTGTTGCCACCAAAAATGGGGGAATATCGGGTGAA CCTACTTTGTTGGATGCTGAGGGAGGCAGGGTCATTAAGAGGAGAGTTGGAAGAGGGAGA CCAAAAGGTTCAAAGAACAAGAAAAAGTTAGGAGCTTTCGATATGGGATTGCCTTGTCAA GTTAGTTGTCAGAATGCTATTAGTAGGATGGTTAAGCGCAGAGGGAGGCCAAAGGGATTA AATGATAAGAAGAAAATTGCTATTGTCCCTGCATGCATGGGAGAGCAGGAACTTAGCACA TATGCAGAAATAAATGGACTGACACAGCCAGGAGTATTGGACACTATCAGTTGGAAGGAT CAGCAGAATTTTAACTGTCATCAATGCAAACATTATAAAGCTGCTGTTGTCTTCTGTTCA AGATGCAAAAGAAAACGCTATTGCAATGATTGTATTGCGAAGTGGTATCCAGAGAGAACA AAAGATGAAGTAGAGTATGCATGCCCTTTCTGTTGCAGGAATTGCAATTGCGGAGCTTGT CTCCAAACAGATGTCTTTTTAAAGGACTGCTGCAAACAAACTGATGAAAAGATAAGACTG GAGGGTTCACTTTATTTGCTTTTCAACATTCTGCCCCTCCTCAGGCATATTCAAAGGGAG CAAAGATCTGAGCTAGATGTTGAAGCAAACATCCGTGGTGTTCGGCTGACAGAAGAAGAC GTTACCAAATCACTCATTGATGATGATGATCGAGTATATTGTGATAATTGCAACACATCC ATTGTCAATTTCCATAGAAGCTGCCCAAATCCTGATTGCTCTTTTGAAATCTGTATCAAT TGTTGTCGGGAACTCAGAGATGGTGCCGCACGTGGAGCTACTGAAGCCAGCTCATCTCTC AGCAAGTCTGTGGAAGCTAGTCATACTGCAGCTTTGAAGGGAAACGTTCCTTCAGATGAT TGGAGAAGTCCAGAGGCCCTCCTTGCTAATGGTTGTCCAAATCACATGTTCTCTGATGTT GCTGAATGGAGAGCCAAATCTGATGGCAGTATACCTTGTCCTCCTAAAGAGCATGGTGGT TGTGGCTCTTCATTAATGGCTCTAAGGCGTATCTTTGAAGCAAATTGGGTTGACCAACTA ATTCAAAGTGCTGAGGCCCTAACATGCAACTACCACCTTCCAGATATGGATTTATCACAT GGGTGTTCAATTTGTCTTGCTACCACTTCTGTCCAAAACAGTGATAACCACTGTCAAGTA AGACAAGCATCTTTTAGGAATAACAGCCACGATAATTCTCTGTACTGTCCTAATGCTGTT CATATTGGTGGTAATGACTTTGAGCATTTTCAAATGCATTGGAGGGCTGGTGAACCTGTA ATAGTTAGAAATGCACAAGCTAAGGCCTCTGGTCTTAGCTGGGAGCCAATGGTAATGTGG AGGGCCTTCAGAAACGCAAGGAAAAAGCTGAACGAGGAGACTTTCTCTGTCAAGTCCATT GATTGCTTGGATTGGTGTCAGGTTGAGATAAATATTCATCAGTTCTTCAAGGGCTACTTA GAGGGTCGTTGGCATCGCAGTGGGTGGCCAGAAATATTAAAACTGAAGGATTGGCCTCCA ACAAATTCTTTTGAAGAATGTTTGCCGAGGCATGGAGCTGACTTTTTTGCTATGCTTCCC TTCAGCGAATACACTCATCCTAGACGCGGTCTTCTAAATTTGGCCACTAAGCTTCCCGAT ACTGCCTTGAAGCCAGACTTGGGGCCTAAAACTTATATTGCTTATGGATATCCAGAAGAG CTTCGGAGAGGTGATTCTGTCACAAAATTGCACTGTGATATCTCTGATGCGGTCAACATA TTGACTCATACAACCGAAGTAAATGTCGCTCACGGGCAACGTGAAATCATTGAGAAACTA AGGAAGCAACATGAGGTTGAAGATTCAAAGGAACTTTGTTCAGGCATAGCAGAGGCACTA GACTCTCAACAAAGATTTGACAAAACTGAAACAATTGATTCTAAATCACAGGGAAGCATC GACGATAACAAAAGTTGCTTGTTAGAAACTATGGACAAGGGGAAAGATTTTGATAAAGAA AAAGACATAATTTCCAATATGAAGTACACTGATATTTCTGGCAGAACTTCTCTATCCGAT GAGATAAACCCAAGTACCAATAGTTTGGCAATAGTAGAAGCAAGTGTGGCTCTCGAAATC AAGCAAGATTGTGCAGAAGTTGAATGTGGCGGTGCGGTATGGGATATCTTTCGCAGACAA GATGTGCCCAAGTTAACAGAATACTTGCAGAAGCATTGGAGAGAATTTCGCCATATTAAC AATGCTCCAGTGACTTCAGTTATTCACCCTATCCATGACCAGACATTCTATTTGAATGAG AAGCACAAAAAACAGCTGAAGGAGGAGTTCAATGTTGAGCCATGGACGTTTGAGCAGTAC CTTGGTGAAGCTGTTTTTATTCCTGCAGGATGCCCACATCAAGTGAGAAATAGACAGTCA TGTATCAAGGTTGCTGTTGACTTTGTATCCCCTGAAAATGTTCAAGAATGTATTCGCTTG ACAGAGGAGTTTCGCTTGCTCCCCAAAACCCACCGATCTAAGCAAGATATATTGGAGGTG AAGAAGTTGGGGCTTTATGCTGCCAGTGTTGCTATTAATGAAGCCACAAATCTGATGTCG AACTTTAATGCTCCTCAATCTTGTGATGAATTGCAACAGCAAGAACAAGCTGCCGAAACT GGGAGCTCCATTGCAGAAGGCCTAGGTGGGAGTCCATCAGCTATAGTAACCAAGAGTTGA

Peptide Sequence

PEP ID	XP_016437061.1
PEP Infomation	PREDICTED: lysine-specific demethylase JMJ25-like [Nicotiana tabacum]
Sequence	MFTQEEQMQGNWDGQQQIVVPFAENVVVATAAAGVVIGSKKRGRPPKGFKEKGGSKGSSK NKRENVDENVGITVSGMRDVSGQGVVMNEKKKRIGRPKGSTNKKRKVGENGEELPSAVDL VNGCGDILIKKKNVGGKPKGSKNKNRNFERNKEGIVKKAHQGRPKGSKNKKKNVTSDEME IVLPIGDTCLEKSNAEIIVANEMSKTDIVAAGDVGISVNQVAGHNEIVKKKAGRPKGSKN KKKDGRPKGSENKKKVGRPKGSKNKKKVLIGLLTVGHWNGGGGKEHIVRQGQRRGSKTKK EITLGYLSNANATTGDEVDVMRQDARKKRITMAGQSGVILNEEEGMIVKKNDGRGRPKKG SNTKNKLILGRSRDINTNNGCGYMDAVSQEDNEKNFFLAVGNGDRIFKKKRRGRPKSSKN KKRSTGGNFIDANLNNGGQDVATTRIDVVEKGILLTEENRGDLNEFAFGSAVRVVRRKGV LGRPKGSKNKKKTITSNSSDVYSGNGVGAMNIWKEHEDKTASLATDRMEILSEVTIAKKD SCSLPHGLHNENKIGESEKANTVNFIPCENGVSERKGSRGRPKGLKNKKKVVFDAVEIQG MTGEIAVDTNGVNLSIKRKNRPGRPKGSTNKKSKNKSEENNKTAVALIMHDNRGGSQAEQ KVKFCGLLPVATKNGGISGEPTLLDAEGGRVIKRRVGRGRPKGSKNKKKLGAFDMGLPCQ VSCQNAISRMVKRRGRPKGLNDKKKIAIVPACMGEQELSTYAEINGLTQPGVLDTISWKD QQNFNCHQCKHYKAAVVFCSRCKRKRYCNDCIAKWYPERTKDEVEYACPFCCRNCNCGAC LQTDVFLKDCCKQTDEKIRLEGSLYLLFNILPLLRHIQREQRSELDVEANIRGVRLTEED VTKSLIDDDDRVYCDNCNTSIVNFHRSCPNPDCSFEICINCCRELRDGAARGATEASSSL SKSVEASHTAALKGNVPSDDWRSPEALLANGCPNHMFSDVAEWRAKSDGSIPCPPKEHGG CGSSLMALRRIFEANWVDQLIQSAEALTCNYHLPDMDLSHGCSICLATTSVQNSDNHCQV RQASFRNNSHDNSLYCPNAVHIGGNDFEHFQMHWRAGEPVIVRNAQAKASGLSWEPMVMW RAFRNARKKLNEETFSVKSIDCLDWCQVEINIHQFFKGYLEGRWHRSGWPEILKLKDWPP TNSFEECLPRHGADFFAMLPFSEYTHPRRGLLNLATKLPDTALKPDLGPKTYIAYGYPEE LRRGDSVTKLHCDISDAVNILTHTTEVNVAHGQREIIEKLRKQHEVEDSKELCSGIAEAL DSQQRFDKTETIDSKSQGSIDDNKSCLLETMDKGKDFDKEKDIISNMKYTDISGRTSLSD EINPSTNSLAIVEASVALEIKQDCAEVECGGAVWDIFRRQDVPKLTEYLQKHWREFRHIN NAPVTSVIHPIHDQTFYLNEKHKKQLKEEFNVEPWTFEQYLGEAVFIPAGCPHQVRNRQS CIKVAVDFVSPENVQECIRLTEEFRLLPKTHRSKQDILEVKKLGLYAASVAINEATNLMS NFNAPQSCDELQQQEQAAETGSSIAEGLGGSPSAIVTKS

Transcript Sequence

Gene sequence data has not been registered.